Protecting the Baltic Sea: Uncovering gaps in MPA management

CCB • March 6, 2025

The Baltic Sea, one of the world’s largest bodies of brackish water, is home to a wealth of varied biodiversity. But this unique and delicate ecosystem is facing increasing pressures from human activities and global threats, such as climate change. A key strategy for safeguarding the sea is the establishment of Marine Protected Areas (MPAs)—designated zones where human activities should be regulated for the benefit of biodiversity, allowing ecosystems to recover and thrive.


Despite globally recognized efforts by the countries bordering the Baltic Sea to designate MPAs, significant gaps remain in their governance, management, and monitoring—both individually and as part of a transboundary network. To address these gaps, the PROTECT BALTIC project—under the umbrella of the regional sea convention HELCOM—is working to better understand the current state of the Baltic Sea MPA network and its management across the region, as well as how countries can collaborate to enhance it. A key step in this process is updating and improving the region’s MPA Portal, a regional platform designed to store comprehensive MPA information and strengthen the capacity of marine protection actors. 


In this process, the project is uncovering some notable challenges, but also some significant opportunities.


Estefania Cortez, PROTECT BALTIC Project Manager / Legal expert from CCB, is leading the task of collecting and compiling information from the Baltic countries’ MPA management plans and other similar official instruments. She provides insights into the complexities of MPA management in the region and the crucial role that the project is playing in modernizing information and bridging existing gaps.

A shared commitment to protecting the Baltic Sea

PROTECT BALTIC is a collaborative effort aimed at strengthening the designation, management, governance and effectiveness of MPAs across the Baltic Sea, with the goal of ensuring quality protection for marine life. Estefania explains, “Initially, our aim was to consolidate and analyze data on nationally recognized MPAs in the Baltic region. But as the project progressed, we realized that the landscape for management of these areas was far more complex than anticipated. Our role evolved from mere data collection to actively verifying and cross-checking information to ensure consistency and accuracy.


The project aims to address the core challenge of fragmented and inconsistent management-related data across different countries, while also reducing barriers to accessing this information. Each nation has its own way of defining, managing, and documenting these areas and there is currently no regional platform where such information can be shared. As Estefania highlights, “While countries bordering the Baltic Sea have made significant strides in establishing MPAs, there remains a lack of a common, unified framework. Each country has its own regulations and management frameworks in place. Some areas, for example, are privately protected, while others are part of large national programs and key strategies. These variations make it difficult to assess and objectively compare how MPAs are being managed across the region as a whole."


The work done so far in PROTECT BALTIC has already led to some groundbreaking results: through our data collection efforts, the number of MPAs documented in the region has increased tenfold. Initially, only 189 MPAs were included in the database, but with new submissions, this number has surged to an astounding 1,876 MPAs. Estefania explains, “A large part of the increase in data is a direct consequence of recent national efforts to continue designating MPAs while strengthening effective measures in those areas.

Collating MPA management data to build a comprehensive picture

The core of this work involves compiling and updating information from MPA management plans—comprehensive documents that outline protection objectives, strategies, and actions for managing each MPA. These typically include details on protection goals, the pressures faced by the area, the specific measures in place to address these challenges, monitoring protocols, and enforcement actions. They are essential for understanding how each MPA is designed to protect marine ecosystems and ensure sustainable use. 


Estefania explains, “Initially, the estimate for the number of available management plans ranged somewhere between 100 and 200. But it turned out there were far more than we anticipated—over 850 plans or similar documents across the region. This required us to rethink our approach and bring in additional support to extract key data from these documents.

The task was complex, involving tracking down the documentation, analyzing the plans, and collecting and collating data. Since most plans are also only available in the national language of the country where the MPA is located, all the collected information also needed to be translated into English as part of the process. With each nation defining and managing MPAs differently, some lacked clear legal frameworks or official documentation, making data interpretation challenging. To address this, the team developed a structured methodology for extracting the data, which was continually tested and refined as specific documents required additional guidance.


A group of nine trainees, with expertise in environmental and data management and fluency in at least one of the Baltic Sea languages, was onboarded. Each trainee focused on a specific Baltic country, except for Sweden, where three trainees were needed to handle the high volume of management plans. Estefania notes, “We quickly realized that translating every single document in its entirety would be too costly and time-consuming, so we trained the team to extract relevant information in their local languages and condense it into a standardized Excel format. We further utilized pre-determined internationally agreed lists on species and habitats, as well as information on human activities and pressures produced within the project.


Harmonizing the data was yet another challenge, as countries defined threats, management measures, and conservation goals in unique ways, sometimes also between areas or area types within the same country. Despite the varied levels of detail in the plans, the team remained flexible and methodical in extracting relevant information.


What has been collected?


The key categories of information collected include:

  • Basic MPA details: name, code, designation year, type, management plan status, IUCN category, stakeholder engagement, and transboundary elements.
  • Protected features: species, habitats, ecological functions as well as cultural heritage and ecosystem services, whenever possible.
  • Human activities and pressures: including shipping, fishing, tourism, and pollution, utilizing the Marine Strategy Framework Directive (MSFD) and Water Framework Directive (WFD) as references.
  • Protection measures: ranging across the whole span of human activities and from seasonal restrictions to full no-take zones.
  • Monitoring efforts: identifying the direct inclusion of ecological or human activities monitoring in the area. The data has been gathered from official national MPA lists, government institutions, legal sources, and ongoing conservation projects such as Biodiversea in Finland. 

Challenges, lessons learned and country profiles

Although the large volume of collected data still requires further processing, and national consultation and review before detailed conclusions can be drawn, one of the key takeaways from this work has been the significant diversity in how MPAs are designated and managed across the Baltic region. Some countries, like Germany and Finland, have multiple jurisdictions responsible for MPA oversight, leading to variations in management plans within the same country. 


A major issue uncovered is the lack of marine-specific protection measures in many MPAs. This raises concerns about the effectiveness of existing protections and highlights the need for adaptive management strategies that allow for the modification or expansion of protection measures as knowledge improves and the dynamics affecting the ecosystem change.


Another significant challenge has been gaps in data comprehensiveness and the availability and accessibility of data. Many management plans either lack critical information or exist only in non-digital formats, complicating data gathering and analysis. Additionally, some countries experienced delays in providing up-to-date documents, either because the information wasn’t available digitally or because the plans were still under revision.


The data gaps became very clear after we received the first round of information from the countries,” Estefania Cortez explains. “Some management plans were missing or incomplete, and in some cases, MPAs themselves were not listed correctly. This is a problem because, without accurate data, we can’t measure the effectiveness of protection efforts or understand where and what additional measures are needed.


While the team has gathered substantial amounts of data—far more than initially expected—Estefania notes, “We have gathered enough data to highlight key trends and challenges, but protection planning requires a comprehensive understanding that goes beyond just data points. This includes broader ecological, economic, and social contexts, which are being actively addressed under other work packages within PROTECT BALTIC.” 


To make the management data as useful as possible, it’s crucial to consider both what has been collected and how it is applied. In some cases, there are challenges with data-sharing between countries or institutions, which can result in incomplete or outdated information being available. Moving forward, refining the datasets to ensure they are comprehensive and applicable will be essential.

The data collection showcased the different approaches each country has adopted:

  • Denmark: The team reviewed 85 management plans covering different types of MPAs, including Natura 2000 sites and other protected areas. However, 51 MPAs have been recently added and are currently being reviewed.
  • Estonia: 38 management plans were reviewed, but many MPAs have overlapping areas with multiple protected area categories, adding an important factor into the assessment process.
  • Finland: The most complex case, with over 1,000 MPAs (including Private Protected Areas). Often these sites fall under multi-management plans, meaning that a single document can cover multiple MPAs.
  • Germany: 82 management plans were reviewed. The country’s approach to MPA management is highly jurisdictional, with different rules applying to MPAs depending on the federal and state governance levels.
  • Lithuania: Only 7 management plans or similar documents were assessed, as most MPAs fall under larger territorial conservation programmes rather than standalone sites.
  • Poland: The team analyzed 22 management plans, which highlight the varied pressures affecting MPAs, from industrial development to tourism.
  • Sweden: With 148 management plans reviewed so far, and 292 still being checked, the trainees are exploring the use of AI to assist and speed up the data extraction process, especially for identifying protected species and habitats within a specific MPA.


An important decision was made regarding Latvia and Åland. Both Latvia and Åland are separately undergoing full-scale revisions of their suite of management plans, with updates expected to be finalized only in the second half of 2025. 


If we included their current management plans in our dataset at this stage, they’d be outdated before they could even be added to the database,” Estefania explains. “So, we decided to wait until their new plans are finalized to ensure we use the most accurate and relevant information. In the meantime, we stay in constant communication with the relevant authorities to track the progress of their updates.

Filling in the blanks

A central aspect of the work has been gathering data on the pressures faced by MPAs, such as overfishing, pollution, and climate change, as well as the mitigation measures being implemented, like fishing restrictions and habitat restoration. While some of this data has been useful, Estefania points out that certain gaps remain: “We are still completing the overarching MPA landscape. There is a lack of data regarding the intensity and location of the pressures. We need more detailed information on how these pressures are affecting specific areas and how effective the mitigation measures have been.


To address this, PROTECT BALTIC is currently working on advancing the spatial modelling of human activities and the resulting pressures, including identifying what pressures are suited for management at MPA level. 


Another significant gap is the limited data collected on MPA monitoring, which is essential for assessing whether management measures are being followed. Estefania explains, “Some countries focus on compliance, while others prioritize ecological tracking. We need to ensure that monitoring systems are standardized, cover both ecology and human activities, and are regularly updated. Opportunely, this in-depth research will be further explored by the Monitoring work package within the project.


The way forward: a unified approach

Looking ahead, PROTECT BALTIC is preparing to analyze the second round of data collection, which was open until February 2025. This round has focused on addressing gaps and refining the initial findings, filling in missing details, cross-checking discrepancies, and ensuring that the dataset is as robust as possible. While the first data call primarily identified MPAs, this phase focuses on understanding how they are managed and protected through specific sectorial measures. The last step in the process will be populating the Baltic Sea MPA database and inviting the countries to review and quality check the data before it is made publicly available.


Estefania emphasizes, “The success of the project depends on collaboration with all Baltic Sea countries. We need their active involvement to validate the data we’ve collected, and we also need their feedback throughout the project to improve the MPA Portal. The more data we can collect, the better we will understand the challenges facing the Baltic Sea, and the better we can recommend suitable solutions to protect these areas.


This second phase will also gather additional information about national legal frameworks, sectoral instruments, and other factors influencing MPA management. The insights gained will be instrumental in shaping future conservation strategies and recommendations, ensuring that the work translates into tangible policy and conservation actions that protect biodiversity.


***
Article written by Paul Trouth, Communication Coordinator (PROTECT BALTIC), and available also on the PROTECT BALTIC´s webpage.


This crucial work on mapping and analyzing MPA management plans will be presented at the 4th EU Blue Parks Community Workshop in Brussels on 6 March 2025, during European Ocean Week.


Estefania Cortez, alongside Jannica Haldin, PROTECT BALTIC's Project Manager, will share insights on the challenges and progress of the project in ensuring sufficient protection and restoration of the Baltic Sea’s marine environment. Their presentation will be part of the session on the state-of-play of strict protection in European seas.

By CCB March 10, 2026
Uppsala, March 2026 - CCB has closely worked with the implementation of the EU Marine Strategy Framework Directive (MSFD) ever since its adoption and welcomed the opportunity to give feedback to this crucial directive for marine biodiversity and ocean health through the EU Call of Evidence . Evaluations conducted by the EU Commission previously found many positive effects for EU marine waters stemming from the directive, but also that the directive has some shortcomings. CCB however, maintains that the largest obstacle to fully implementing the directive and achieving Good Environmental Status (GES) is the lack of political will among Member States to do so. This forthcoming revision must therefore result in a framework directive that is more easily enforceable, measurable and implementable, accompanied by sufficient funding to carry out the measures. Furthermore, in order to achieve GES as fast as possible other key pieces of EU legislation must also support reaching it and focus on achieving the goals of the MSFD in their objectives. Seeing that European seas generally are in poor condition and under mounting pressure from human activities and that in the Baltic Sea the situation is especially dire there is an urgent need for truly ecosystem-based management of our seas and for reaching GES. The revised MSFD can help us achieve this, but only if it includes the points outlined below and the directive is fully and swiftly implemented: *** [Short version]*** Operationalise the overarching GES goal: EU sea areas were supposed to reach GES already in 2020, but due to low political ambition, sadly did not do so. Member States should therefore strive to reach GES as fast as possible now. Setting a new overall deadline for when to reach GES is not the answer on how to achieve this goal most efficiently, instead tools that address pressures and measure progress and ensure actual, timely implementation of ambitious measures must be included in the revised directive in order to operationalise achieving the overall GES goal. CCB therefore recommends making the existing and forthcoming threshold values for the descriptors and their criteria legally binding and part of the main directive. Improving regional coordination and implementation: To improve the coherence, coordination and effectiveness of MSFD implementation, assessment of GES, monitoring and the national PoMs the role of the Regional Seas Conventions (RSCs) must be clarified. CCB would welcome collating all the national PoMs into one regional PoM for the Baltic Sea, which should be aligned with, in addition to reaching the goals of the MSFD, with achieving the goals of the Baltic Sea Action Plan (BSAP). Land-sea interface: For the Baltic Sea to achieve GES it is key that land-based pressures, primarily nutrient runoff from agriculture causing severe eutrophication, is also addressed and that implementation of the MSFD goes hand in hand with the implementation of the Water Framework Directive (WFD). The goals of the MSFD and achieving GES should also be included when implementing and shaping the Common Agricultural Policy (CAP), as well as any synergies with implementing the EU Zero Pollution Action Plan which are also important to identify and utilise. The Baltic Sea also has a too high prevalence and level of other pollutants and hazardous substances affecting marine life. Fisheries and aquaculture: As one of the main pressure factors on the marine environment in general, as well as in the Baltic Sea, fisheries and aquaculture and the effects they have on the marine ecosystem and its biodiversity must be addressed in order to achieve GES. This is especially crucial when considering the MSFD descriptor for Biodiversity (D1), Fish and Shellfish (D3), Food webs (D4) and the one for Seabed integrity (D6). Climate change: Climate change is also affecting the Baltic Sea faster than other marine regions and must be factored in when managing the sea area and its resources to ensure EBM and the full implementation of the MSFD and achieving GES. The effects of the climate crisis should be accounted for when setting pressure reduction targets and threshold values for the descriptors and their criteria, in a way that when an effect cannot be measured nor predicted the precautionary principle must be used. Revising Art. 14 of the MSFD: Article 14 in the MSFD outlines the acceptable exceptions when reaching GES is not possible. The article needs to be revised in the forthcoming revision, since it contains too many and too broad in scope possibilities for exemptions (e.g. in Art. 14(4)), which jeopardise the implementation and fulfilment of the directive as a whole. A possible way of modifying it would be to introduce an obligation for Member States to demonstrate that they have taken all measures within their control nationally and that they have tried to address the problem and advance solving it on a regional level through cooperating with other Member States, before they can apply for a possible exemption. Make the Programme of Measures contain ambitious & concrete measures: One of the cornerstones of the MSFD is the national PoMs that are published every six years and are precluded by an assessment of GES in national waters and a monitoring programme. Unfortunately, the current approach to PoMs where Member States freely can choose measures has led to an overall too low level of ambition in the PoMs, and to large differences within regions and between neighboring countries in terms of which measures are included. In order to fully implement the directive and to achieve GES it is of paramount importance that the national PoMs have a high level of ambition and contain concrete, implementable measures and that there is regional coordination. Easing the reporting burden: One of the results from the evaluation of the MSFD was that the current reporting burden is considered to be too high and a possible way to address this is to align the reporting obligations of the MSFD to more reassemble those of the WFD, that has a more simplified 6-year cycle compared to the MSFD. The implementation cycle however should not be revised or at least not in a way that delays reaching GES. Improve coherence with other legislation: To ensure that the revised MSFD is fully implemented it is essential that coherence with other relevant legislation is improved. The MSPD (foundation for the forthcoming Ocean Act) is also currently being revised and to reach the goals for both the directives achieving GES needs to be a cornerstone of the Ocean Act. This is the only way to deliver truly ecosystem-based management of our seas, and the revision of both directives should therefore be coordinated and focused on achieving GES. CCB looks forward to continuing to provide input to the revision process of the MSFD as well as working with the implementation of the MSFD, especially in the Baltic Sea. CCB expects that the revision will result in a more enforceable directive that leads to the fast implementation of ambitious measures to improve the state of the Baltic and European Sea areas and to the achievement of GES. The full text of the submission is available here . *** Links to supplemental documents supporting our positions: CCB’s submission to the Call for Evidence for the Ocean Act Guiding Recommendations for Source-to-Sea Restoration in Riverine, Coastal, and Marine Ecosystems (Coalition Clean Baltic, 2025) Position Paper on Marine Protected Areas (Coalition Clean Baltic 2024) Don’t sink the Common Fisheries Policy – fulfil its potential (joint NGO Briefing 2025) Blue Manifesto (joint NGO paper)
By CCB February 24, 2026
Coalition Clean Baltic – CCB is a politically independent network, uniting 28 environmental non-profit organizations, as well as partners and experts from 11 countries surrounding the Baltic Sea. The main goal of CCB is to promote the protection and improvement of the environment and natural resources of the Baltic Sea region by encouraging new and constructive approaches and engaging people to become part of the solution instead of part of the problem. CCB Secretariat is based in Uppsala, Sweden. About the Role Coalition Clean Baltic (CCB) is seeking a Marine Policy Officer (parental leave cover) to join its International Secretariat and contribute substantively to regional and EU-level marine advocacy, with a particular focus on the Baltic Sea. The Marine Policy Officer will support the implementation of EU and international marine environmental policy frameworks — notably the EU Marine Strategy Framework Directive (MSFD), the EU Maritime Spatial Planning Directive (MSPD) and the HELCOM Baltic Sea Action Plan (BSAP) . All work is grounded in the promotion of ecosystem-based management. The role includes close collaboration with the rest of the Secretariat team as well as CCB member organisations to deliver policy initiatives, advocacy actions, and strategic programme objectives. The Marine Policy Officer will also support the International Secretariat in fundraising, with a focus on the EU LIFE operational grant application. Key Responsibilities Policy & Advocacy Support the implementation of CCB’s strategic plan on marine biodiversity policy. Contribute to marine policy advocacy at EU and at Baltic Sea regional levels (e.g. HELCOM, EU Commission expert groups). Provide input to the implementation and revision of the Marine Strategy Framework Directive. Collect evidence and views to provide NGO inputs to the forthcoming EU Ocean Act and related initiatives. Support the implementation of the Helsinki Convention and Baltic Sea Action Plan. Engage in the revision processes related to the Marine Spatial Planning Directive (MSPD). Programme & Grant Delivery Provide critical support in fundraising, i.e. project proposal development, especially for securing core grant funding (e.g. for the EU LIFE Programme and potentially Horizon programme). Contribute to CCB´s project management, implementation and reporting activities for various projects. Coordination & Monitoring Closely coordinate marine biodiversity policy work with CCB member organisations. Monitor global, EU, and regional marine policy developments. Liaise with partner NGOs and civil society organisations. Communications & Policy Products Draft position papers, policy briefings, consultation inputs and technical reports on relevant files. Support communications and outreach on marine policy issues. Help organise workshops, conferences, and stakeholder events. Represent CCB in policy dialogues, expert groups, and stakeholder forums at the EU and Baltic Sea level. Cross-organisational Support within the Secretariat and its members Contribute to other CCB thematic working areas as required. Profile We are seeking a policy professional who is: Solutions-oriented and adaptable Experienced in advocacy or campaigning Collaborative and team-driven Passionate about marine conservation Organised, diplomatic, and stakeholder-confident Required Qualifications & Experience Demonstrable professional experience in marine or environmental policy. Working knowledge of key EU frameworks, particularly the EU Marine Strategy Framework Directive (MSFD). Knowledge of Helcom BSAP is an asset. Postgraduate qualification in marine science, ecology, conservation, water management, or related discipline with substantial marine focus. Eligibility to work and travel within the EU (citizenship or valid permit) with residency in Sweden. Excellent written and spoken English. CCB also welcomes applicants from broader environmental policy/law backgrounds who can demonstrate relevant knowledge. Desirable Skills Experience within the NGO or civil society sector preferred. Advocacy or campaigning experience within the EU, the Baltic Sea or international environmental policy processes. Working knowledge of a Baltic Sea region language (e.g. Swedish, Danish, Finnish, German, Polish, Latvian, Lithuanian, Estonian).